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  5. Zm00001d035023_T001

Zm00001d035023_T001


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0011475 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011475_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d035023_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d035023_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_94
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_127


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0006335 DNA replication-dependent chromatin assembly ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt ProSiteProfiles 151 182
IPR001680 WD40_rpt SMART 54 93
IPR001680 WD40_rpt SMART 3 41
IPR001680 WD40_rpt SMART 328 368
IPR001680 WD40_rpt SMART 270 325
IPR001680 WD40_rpt SMART 102 141
IPR001680 WD40_rpt SMART 144 183
IPR019775 WD40_repeat_CS ProSitePatterns 28 42
IPR001680 WD40_rpt Pfam 62 92
IPR001680 WD40_rpt Pfam 10 40
IPR001680 WD40_rpt Pfam 339 366
IPR001680 WD40_rpt Pfam 107 140
IPR001680 WD40_rpt Pfam 146 182
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 4 227
IPR001680 WD40_rpt ProSiteProfiles 16 50
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 10 367
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 231 387
IPR001632 Gprotein_B PRINTS 109 125
IPR001632 Gprotein_B PRINTS 128 142
IPR001632 Gprotein_B PRINTS 165 182
IPR001680 WD40_rpt ProSiteProfiles 61 94
IPR045145 PTHR15271 PANTHER 1 459
IPR001680 WD40_rpt ProSiteProfiles 109 150
IPR045145 PTHR15271 PANTHER 1 459
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 10 367
IPR001680 WD40_rpt SMART 54 93
IPR001680 WD40_rpt SMART 3 41
IPR001680 WD40_rpt SMART 328 368
IPR001680 WD40_rpt SMART 270 325
IPR001680 WD40_rpt SMART 102 141
IPR001680 WD40_rpt SMART 144 183
IPR019775 WD40_repeat_CS ProSitePatterns 28 42
IPR001680 WD40_rpt ProSiteProfiles 109 150
IPR001680 WD40_rpt ProSiteProfiles 151 182
IPR001680 WD40_rpt ProSiteProfiles 61 94
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 231 387
IPR001632 Gprotein_B PRINTS 109 125
IPR001632 Gprotein_B PRINTS 128 142
IPR001632 Gprotein_B PRINTS 165 182
IPR001680 WD40_rpt Pfam 147 182
IPR001680 WD40_rpt Pfam 108 140
IPR001680 WD40_rpt Pfam 339 364
IPR001680 WD40_rpt Pfam 11 40
IPR001680 WD40_rpt Pfam 62 92
IPR001680 WD40_rpt ProSiteProfiles 16 50
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 4 227

No CAZYmes available for this sequence

No external refs found!