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  5. Zm00001d035083_T001

Zm00001d035083_T001


Description : expansin A23


Gene families : OG_01_0028368 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0028368_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d035083_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d035083_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_199
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_68


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
BP GO:0009664 plant-type cell wall organization ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036749 Expansin_CBD_sf SUPERFAMILY 169 273
IPR007117 Expansin_CBD ProSiteProfiles 182 273
IPR036749 Expansin_CBD_sf Gene3D 168 277
IPR002963 Expansin PRINTS 72 86
IPR002963 Expansin PRINTS 111 121
IPR002963 Expansin PRINTS 171 183
IPR002963 Expansin PRINTS 183 204
IPR002963 Expansin PRINTS 128 145
IPR009009 RlpA-like_DPBB Pfam 78 161
IPR036908 RlpA-like_sf SUPERFAMILY 24 190
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 60 171
IPR002963 Expansin PANTHER 21 275
IPR036908 RlpA-like_sf Gene3D 30 166
IPR007118 Expan_Lol_pI PRINTS 154 170
IPR007118 Expan_Lol_pI PRINTS 81 99
IPR007118 Expan_Lol_pI PRINTS 59 77
IPR007118 Expan_Lol_pI PRINTS 219 233
IPR007118 Expan_Lol_pI PRINTS 259 273
IPR007118 Expan_Lol_pI PRINTS 41 56
IPR007117 Expansin_CBD Pfam 173 262
IPR007112 Expansin/allergen_DPBB_dom SMART 77 161
IPR036749 Expansin_CBD_sf Gene3D 168 277
IPR007118 Expan_Lol_pI PRINTS 154 170
IPR007118 Expan_Lol_pI PRINTS 81 99
IPR007118 Expan_Lol_pI PRINTS 59 77
IPR007118 Expan_Lol_pI PRINTS 219 233
IPR007118 Expan_Lol_pI PRINTS 259 273
IPR007118 Expan_Lol_pI PRINTS 41 56
IPR002963 Expansin PRINTS 72 86
IPR002963 Expansin PRINTS 111 121
IPR002963 Expansin PRINTS 171 183
IPR002963 Expansin PRINTS 183 204
IPR002963 Expansin PRINTS 128 145
IPR002963 Expansin PANTHER 22 277
IPR036749 Expansin_CBD_sf SUPERFAMILY 169 273
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 60 171
IPR036908 RlpA-like_sf Gene3D 30 166
IPR036908 RlpA-like_sf SUPERFAMILY 24 190
IPR007117 Expansin_CBD ProSiteProfiles 182 273
IPR007117 Expansin_CBD Pfam 173 262
IPR007112 Expansin/allergen_DPBB_dom SMART 77 161
IPR009009 RlpA-like_DPBB Pfam 77 161

No CAZYmes available for this sequence

No external refs found!