Zm00001d035087_T002

Description : 60S acidic ribosomal protein family

Gene families : OG_01_0007890 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007890_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d035087_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d035087_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_63
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_178

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	ISM	GOs from InterProScan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	ISM	GOs from InterProScan
BP	GO:0006412	translation	ISM	GOs from InterProScan
BP	GO:0006414	translational elongation	ISM	GOs from InterProScan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR038716	P1/P2_N_sf	Gene3D	1	63
IPR027534	Ribosomal_P1/P2	Hamap	6	109
IPR001859	Ribosomal_P1/P2_euk	PRINTS	96	107
IPR001859	Ribosomal_P1/P2_euk	PRINTS	69	80
IPR001859	Ribosomal_P1/P2_euk	PRINTS	81	95
IPR001859	Ribosomal_P1/P2_euk	PRINTS	25	36
IPR027534	Ribosomal_P1/P2	Hamap	6	109
IPR038716	P1/P2_N_sf	Gene3D	1	63
IPR001859	Ribosomal_P1/P2_euk	PRINTS	96	107
IPR001859	Ribosomal_P1/P2_euk	PRINTS	69	80
IPR001859	Ribosomal_P1/P2_euk	PRINTS	81	95
IPR001859	Ribosomal_P1/P2_euk	PRINTS	25	36

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d035087_T002

Expression Profile

Co-expression Networks

Functional Annotation