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  5. Zm00001d035989_T001

Zm00001d035989_T001


Description : Pentatricopeptide repeat (PPR-like) superfamily protein


Gene families : OG_01_0003902 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003902_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d035989_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d035989_T001 No neighbors in network
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_75


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt Pfam 347 370
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 199 233
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 339 373
IPR002885 Pentatricopeptide_rpt NCBIfam 306 340
IPR002885 Pentatricopeptide_rpt NCBIfam 344 374
IPR002885 Pentatricopeptide_rpt NCBIfam 272 305
IPR002885 Pentatricopeptide_rpt NCBIfam 236 270
IPR002885 Pentatricopeptide_rpt NCBIfam 201 235
IPR011990 TPR-like_helical_dom_sf Gene3D 259 398
IPR011990 TPR-like_helical_dom_sf Gene3D 82 258
IPR002885 Pentatricopeptide_rpt Pfam 198 246
IPR002885 Pentatricopeptide_rpt Pfam 268 317
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 234 268
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 269 303
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 304 338
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 234 268
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 269 303
IPR002885 Pentatricopeptide_rpt Pfam 268 317
IPR002885 Pentatricopeptide_rpt Pfam 198 246
IPR002885 Pentatricopeptide_rpt Pfam 347 370
IPR002885 Pentatricopeptide_rpt TIGRFAM 306 340
IPR002885 Pentatricopeptide_rpt TIGRFAM 344 374
IPR002885 Pentatricopeptide_rpt TIGRFAM 236 270
IPR002885 Pentatricopeptide_rpt TIGRFAM 201 235
IPR002885 Pentatricopeptide_rpt TIGRFAM 272 305
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 304 338
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 199 233
IPR011990 TPR-like_helical_dom_sf Gene3D 259 398
IPR011990 TPR-like_helical_dom_sf Gene3D 82 258
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 339 373

No CAZYmes available for this sequence

No external refs found!