Zm00001d036148_T003

Description : ssDNA-binding transcriptional regulator

Gene families : OG_01_0007568 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007568_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d036148_T003
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d036148_T003
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_261
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_267

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0003697	single-stranded DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	ISM	GOs from InterProScan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR013742	Whirly	PANTHER	77	286
IPR013742	Whirly	Pfam	92	179
IPR013742	Whirly	Pfam	191	246
IPR009044	ssDNA-bd_transcriptional_reg	SUPERFAMILY	84	286
IPR009044	ssDNA-bd_transcriptional_reg	Gene3D	78	270
IPR009044	ssDNA-bd_transcriptional_reg	Gene3D	78	270
IPR013742	Whirly	PANTHER	51	175
IPR013742	Whirly	PANTHER	193	286
IPR013742	Whirly	Pfam	92	179
IPR013742	Whirly	Pfam	192	246
IPR009044	ssDNA-bd_transcriptional_reg	SUPERFAMILY	84	286

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d036148_T003

Expression Profile

Co-expression Networks

Functional Annotation