Zm00001d036305_T003

Description : Adaptor protein complex AP-1, gamma subunit

Gene families : OG_01_0001020 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001020_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d036305_T003
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d036305_T003
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_217
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_58

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005794	Golgi apparatus	ISM	GOs from InterProScan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	ISM	GOs from InterProScan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	ISM	GOs from InterProScan
CC	GO:0030117	membrane coat	ISM	GOs from InterProScan
CC	GO:0030119	AP-type membrane coat adaptor complex	None	Extended
CC	GO:0030121	AP-1 adaptor complex	ISM	GOs from InterProScan
CC	GO:0030131	clathrin adaptor complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR008152	Clathrin_a/b/g-adaptin_app_Ig	SMART	783	903
IPR002553	Clathrin/coatomer_adapt-like_N	Pfam	68	621
IPR017107	AP1_complex_gsu	PIRSF	47	906
IPR008153	GAE_dom	ProSiteProfiles	786	903
IPR011989	ARM-like	Gene3D	37	636
IPR008152	Clathrin_a/b/g-adaptin_app_Ig	Pfam	790	903
IPR016024	ARM-type_fold	SUPERFAMILY	66	635
IPR013041	Clathrin_app_Ig-like_sf	SUPERFAMILY	766	905
IPR016024	ARM-type_fold	SUPERFAMILY	66	635
IPR013041	Clathrin_app_Ig-like_sf	SUPERFAMILY	766	905
IPR017107	AP1_complex_gsu	PIRSF	47	906
IPR008152	Clathrin_a/b/g-adaptin_app_Ig	Pfam	789	903
IPR008153	GAE_dom	ProSiteProfiles	786	903
IPR011989	ARM-like	Gene3D	37	636
IPR002553	Clathrin/coatomer_adapt-like_N	Pfam	68	621
IPR008152	Clathrin_a/b/g-adaptin_app_Ig	SMART	783	903

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d036305_T003

Expression Profile

Co-expression Networks

Functional Annotation