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Description : binding
Gene families : OG_01_0000390 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000390_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d036583_T001 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d036583_T001 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_5 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_184 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR046851 | NBCH_WD40 | Pfam | 1535 | 1883 |
| IPR000409 | BEACH_dom | ProSiteProfiles | 1224 | 1514 |
| IPR031570 | NBEA/BDCP_DUF4704 | Pfam | 1 | 513 |
| IPR000409 | BEACH_dom | SMART | 1236 | 1514 |
| IPR000409 | BEACH_dom | CDD | 1237 | 1514 |
| IPR011993 | PH-like_dom_sf | Gene3D | 1057 | 1196 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 1617 | 1891 |
| IPR036372 | BEACH_dom_sf | SUPERFAMILY | 1218 | 1514 |
| IPR023362 | PH-BEACH_dom | Pfam | 1065 | 1196 |
| IPR036372 | BEACH_dom_sf | Gene3D | 1228 | 1514 |
| IPR023362 | PH-BEACH_dom | ProSiteProfiles | 1054 | 1200 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 1624 | 1881 |
| IPR000409 | BEACH_dom | Pfam | 1237 | 1514 |
| IPR001680 | WD40_rpt | SMART | 1837 | 1875 |
| IPR001680 | WD40_rpt | SMART | 1796 | 1834 |
| IPR001680 | WD40_rpt | SMART | 1647 | 1686 |
| IPR001680 | WD40_rpt | SMART | 1712 | 1751 |
| IPR023362 | PH-BEACH_dom | CDD | 1058 | 1203 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 1654 | 1695 |
| IPR001680 | WD40_rpt | SMART | 1837 | 1875 |
| IPR001680 | WD40_rpt | SMART | 1796 | 1834 |
| IPR001680 | WD40_rpt | SMART | 1712 | 1751 |
| IPR001680 | WD40_rpt | SMART | 1647 | 1686 |
| IPR023362 | PH-BEACH_dom | Pfam | 1065 | 1196 |
| IPR036372 | BEACH_dom_sf | Gene3D | 1228 | 1514 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 1654 | 1695 |
| IPR000409 | BEACH_dom | SMART | 1236 | 1514 |
| IPR001680 | WD40_rpt | Pfam | 1650 | 1685 |
| IPR001680 | WD40_rpt | Pfam | 1714 | 1747 |
| IPR023362 | PH-BEACH_dom | CDD | 1058 | 1203 |
| IPR000409 | BEACH_dom | ProSiteProfiles | 1224 | 1514 |
| IPR036372 | BEACH_dom_sf | SUPERFAMILY | 1218 | 1514 |
| IPR023362 | PH-BEACH_dom | ProSiteProfiles | 1054 | 1200 |
| IPR000409 | BEACH_dom | Pfam | 1237 | 1514 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 1617 | 1891 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 1624 | 1881 |
| IPR000409 | BEACH_dom | CDD | 1237 | 1514 |
| IPR031570 | NBEA/BDCP_DUF4704 | Pfam | 1 | 266 |
| IPR011993 | PH-like_dom_sf | Gene3D | 1057 | 1196 |
No CAZYmes available for this sequence
| No external refs found! |