1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001d036594_T001

Zm00001d036594_T001


Description : cleavage and polyadenylation specificity factor 30


Gene families : OG_01_0007285 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007285_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d036594_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d036594_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_203
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_276


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISM GOs from InterProScan
MF GO:0046872 metal ion binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR007275 YTH_domain ProSiteProfiles 245 380
IPR007275 YTH_domain Pfam 245 379
IPR000571 Znf_CCCH ProSiteProfiles 84 109
IPR000571 Znf_CCCH ProSiteProfiles 56 83
IPR045168 YTH_prot PANTHER 98 438
IPR000571 Znf_CCCH SMART 112 136
IPR000571 Znf_CCCH SMART 84 110
IPR000571 Znf_CCCH SMART 56 82
IPR007275 YTH_domain CDD 246 380
IPR000571 Znf_CCCH ProSiteProfiles 110 137
IPR036855 Znf_CCCH_sf SUPERFAMILY 57 81
IPR045168 YTH_prot PANTHER 1 646
IPR000571 Znf_CCCH SMART 112 136
IPR000571 Znf_CCCH SMART 84 110
IPR000571 Znf_CCCH SMART 56 82
IPR007275 YTH_domain Pfam 245 307
IPR007275 YTH_domain Pfam 324 379
IPR000571 Znf_CCCH ProSiteProfiles 56 83
IPR036855 Znf_CCCH_sf SUPERFAMILY 57 81
IPR000571 Znf_CCCH ProSiteProfiles 110 137
IPR000571 Znf_CCCH ProSiteProfiles 84 109
IPR007275 YTH_domain ProSiteProfiles 245 380

No CAZYmes available for this sequence

No external refs found!