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  5. Zm00001d036698_T001

Zm00001d036698_T001


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0015164 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015164_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d036698_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d036698_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_176
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_203


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 279 313
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 666 700
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 489 523
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 384 418
IPR002885 Pentatricopeptide_rpt Pfam 457 486
IPR002885 Pentatricopeptide_rpt Pfam 739 762
IPR002885 Pentatricopeptide_rpt Pfam 703 733
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 630 664
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 208 243
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 419 453
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 314 348
IPR002885 Pentatricopeptide_rpt NCBIfam 703 735
IPR002885 Pentatricopeptide_rpt NCBIfam 281 315
IPR002885 Pentatricopeptide_rpt NCBIfam 421 453
IPR002885 Pentatricopeptide_rpt NCBIfam 316 350
IPR002885 Pentatricopeptide_rpt NCBIfam 457 488
IPR002885 Pentatricopeptide_rpt NCBIfam 176 208
IPR002885 Pentatricopeptide_rpt NCBIfam 597 630
IPR002885 Pentatricopeptide_rpt NCBIfam 247 278
IPR002885 Pentatricopeptide_rpt NCBIfam 668 700
IPR002885 Pentatricopeptide_rpt NCBIfam 210 244
IPR002885 Pentatricopeptide_rpt NCBIfam 387 419
IPR002885 Pentatricopeptide_rpt NCBIfam 492 525
IPR002885 Pentatricopeptide_rpt NCBIfam 351 385
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 701 735
IPR002885 Pentatricopeptide_rpt Pfam 404 433
IPR002885 Pentatricopeptide_rpt Pfam 171 221
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 595 629
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 244 278
IPR002885 Pentatricopeptide_rpt Pfam 594 643
IPR002885 Pentatricopeptide_rpt Pfam 488 537
IPR002885 Pentatricopeptide_rpt Pfam 278 321
IPR002885 Pentatricopeptide_rpt Pfam 348 395
IPR011990 TPR-like_helical_dom_sf Gene3D 551 661
IPR011990 TPR-like_helical_dom_sf Gene3D 662 783
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 454 488
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 173 514
IPR011990 TPR-like_helical_dom_sf Gene3D 82 225
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 173 207
IPR002885 Pentatricopeptide_rpt Pfam 663 694
IPR002885 Pentatricopeptide_rpt Pfam 240 270
IPR011990 TPR-like_helical_dom_sf Gene3D 307 379
IPR011990 TPR-like_helical_dom_sf Gene3D 484 550
IPR011990 TPR-like_helical_dom_sf Gene3D 228 306
IPR011990 TPR-like_helical_dom_sf Gene3D 380 483
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 349 383
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 279 313
IPR011990 TPR-like_helical_dom_sf Gene3D 551 661
IPR011990 TPR-like_helical_dom_sf Gene3D 662 783
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 173 514
IPR002885 Pentatricopeptide_rpt Pfam 348 395
IPR002885 Pentatricopeptide_rpt Pfam 488 537
IPR002885 Pentatricopeptide_rpt Pfam 278 319
IPR002885 Pentatricopeptide_rpt Pfam 594 643
IPR002885 Pentatricopeptide_rpt Pfam 171 221
IPR002885 Pentatricopeptide_rpt Pfam 404 433
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 630 664
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 244 278
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 595 629
IPR002885 Pentatricopeptide_rpt TIGRFAM 457 488
IPR002885 Pentatricopeptide_rpt TIGRFAM 668 700
IPR002885 Pentatricopeptide_rpt TIGRFAM 597 630
IPR002885 Pentatricopeptide_rpt TIGRFAM 421 453
IPR002885 Pentatricopeptide_rpt TIGRFAM 316 350
IPR002885 Pentatricopeptide_rpt TIGRFAM 247 278
IPR002885 Pentatricopeptide_rpt TIGRFAM 387 419
IPR002885 Pentatricopeptide_rpt TIGRFAM 281 315
IPR002885 Pentatricopeptide_rpt TIGRFAM 351 385
IPR002885 Pentatricopeptide_rpt TIGRFAM 210 244
IPR002885 Pentatricopeptide_rpt TIGRFAM 703 735
IPR002885 Pentatricopeptide_rpt TIGRFAM 176 208
IPR002885 Pentatricopeptide_rpt TIGRFAM 492 525
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 666 700
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 489 523
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 701 735
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 349 383
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 173 207
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 384 418
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 454 488
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 419 453
IPR002885 Pentatricopeptide_rpt Pfam 663 694
IPR002885 Pentatricopeptide_rpt Pfam 240 270
IPR011990 TPR-like_helical_dom_sf Gene3D 307 379
IPR011990 TPR-like_helical_dom_sf Gene3D 484 550
IPR011990 TPR-like_helical_dom_sf Gene3D 228 306
IPR011990 TPR-like_helical_dom_sf Gene3D 380 483
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 314 348
IPR011990 TPR-like_helical_dom_sf Gene3D 82 225
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 208 243
IPR002885 Pentatricopeptide_rpt Pfam 703 733
IPR002885 Pentatricopeptide_rpt Pfam 457 486
IPR002885 Pentatricopeptide_rpt Pfam 739 762

No CAZYmes available for this sequence

No external refs found!