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  5. Zm00001d036709_T001

Zm00001d036709_T001


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0013439 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013439_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d036709_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d036709_T001 No neighbors in network
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_114


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt ProSiteProfiles 166 200
IPR001680 WD40_rpt ProSiteProfiles 32 63
IPR019775 WD40_repeat_CS ProSitePatterns 94 108
IPR001680 WD40_rpt ProSiteProfiles 75 116
IPR001680 WD40_rpt SMART 153 191
IPR001680 WD40_rpt SMART 25 64
IPR001680 WD40_rpt SMART 68 107
IPR001680 WD40_rpt SMART 240 283
IPR001680 WD40_rpt SMART 110 150
IPR001680 WD40_rpt SMART 286 325
IPR001680 WD40_rpt SMART 194 233
IPR020472 G-protein_beta_WD-40_rep PRINTS 220 234
IPR020472 G-protein_beta_WD-40_rep PRINTS 94 108
IPR020472 G-protein_beta_WD-40_rep PRINTS 137 151
IPR001680 WD40_rpt ProSiteProfiles 262 292
IPR001680 WD40_rpt ProSiteProfiles 201 235
IPR001680 WD40_rpt ProSiteProfiles 293 326
IPR019775 WD40_repeat_CS ProSitePatterns 137 151
IPR001680 WD40_rpt ProSiteProfiles 117 159
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 24 326
IPR001680 WD40_rpt Pfam 28 63
IPR001680 WD40_rpt Pfam 73 107
IPR001680 WD40_rpt Pfam 111 150
IPR001680 WD40_rpt Pfam 243 283
IPR001680 WD40_rpt Pfam 289 322
IPR001680 WD40_rpt Pfam 159 191
IPR001680 WD40_rpt Pfam 199 233
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 29 322
IPR019775 WD40_repeat_CS ProSitePatterns 270 284
IPR001680 WD40_rpt ProSiteProfiles 201 235
IPR019775 WD40_repeat_CS ProSitePatterns 94 108
IPR001680 WD40_rpt ProSiteProfiles 293 326
IPR020472 G-protein_beta_WD-40_rep PRINTS 220 234
IPR020472 G-protein_beta_WD-40_rep PRINTS 94 108
IPR020472 G-protein_beta_WD-40_rep PRINTS 137 151
IPR001680 WD40_rpt ProSiteProfiles 75 116
IPR019775 WD40_repeat_CS ProSitePatterns 270 284
IPR019775 WD40_repeat_CS ProSitePatterns 137 151
IPR001680 WD40_rpt ProSiteProfiles 32 63
IPR001680 WD40_rpt Pfam 112 150
IPR001680 WD40_rpt Pfam 29 63
IPR001680 WD40_rpt Pfam 199 233
IPR001680 WD40_rpt Pfam 70 107
IPR001680 WD40_rpt Pfam 242 283
IPR001680 WD40_rpt ProSiteProfiles 262 292
IPR001680 WD40_rpt SMART 25 64
IPR001680 WD40_rpt SMART 153 191
IPR001680 WD40_rpt SMART 68 107
IPR001680 WD40_rpt SMART 240 283
IPR001680 WD40_rpt SMART 110 150
IPR001680 WD40_rpt SMART 286 325
IPR001680 WD40_rpt SMART 194 233
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 24 326
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 29 322
IPR001680 WD40_rpt ProSiteProfiles 117 159
IPR001680 WD40_rpt ProSiteProfiles 166 200

No CAZYmes available for this sequence

No external refs found!