Zm00001d037422_T001

Description : Signal recognition particle, SRP9/SRP14 subunit

Gene families : OG_01_0015000 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015000_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d037422_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d037422_T001	No neighbors in network
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_114

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	None	Extended
BP	GO:0006613	cotranslational protein targeting to membrane	None	Extended
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	ISM	GOs from InterProScan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008312	7S RNA binding	ISM	GOs from InterProScan
BP	GO:0009987	cellular process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0045047	protein targeting to ER	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
CC	GO:0048500	signal recognition particle	ISM	GOs from InterProScan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0070972	protein localization to endoplasmic reticulum	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR009018	Signal_recog_particle_SRP9/14	SUPERFAMILY	49	124
IPR039914	SRP9-like	PANTHER	46	148
IPR009018	Signal_recog_particle_SRP9/14	Gene3D	47	127
IPR039432	SRP9_dom	Pfam	49	111
IPR009018	Signal_recog_particle_SRP9/14	SUPERFAMILY	49	124
IPR009018	Signal_recog_particle_SRP9/14	Gene3D	47	127
IPR039914	SRP9-like	PANTHER	46	148
IPR039432	SRP9_dom	Pfam	50	111

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d037422_T001

Expression Profile

Co-expression Networks

Functional Annotation