Zm00001d037557_T065

Description : ubiquitin protein ligase 6

Gene families : OG_01_0000942 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000942_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d037557_T065
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d037557_T065
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_81
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_27

Type	GO Term	Name	Evidence	Source
BP	GO:0000209	protein polyubiquitination	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	ISM	GOs from InterProScan
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000048	IQ_motif_EF-hand-BS	ProSiteProfiles	45	72
IPR044611	E3A/B/C-like	PANTHER	1	1039
IPR035983	Hect_E3_ubiquitin_ligase	SUPERFAMILY	671	1031
IPR000569	HECT_dom	SMART	696	1039
IPR000569	HECT_dom	ProSiteProfiles	698	1039
IPR000569	HECT_dom	CDD	677	1037
IPR000569	HECT_dom	Pfam	734	1039
IPR000569	HECT_dom	CDD	677	1037
IPR000569	HECT_dom	ProSiteProfiles	698	1039
IPR000569	HECT_dom	SMART	696	1039
IPR000569	HECT_dom	Pfam	734	1039
IPR035983	Hect_E3_ubiquitin_ligase	SUPERFAMILY	671	1031
IPR000048	IQ_motif_EF-hand-BS	ProSiteProfiles	45	72
IPR044611	E3A/B/C-like	PANTHER	1	1039

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d037557_T065

Expression Profile

Co-expression Networks

Functional Annotation