Zm00001d037860_T001

Description : N2,N2-dimethylguanosine tRNA methyltransferase

Gene families : OG_01_0015994 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015994_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d037860_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d037860_T001	No neighbors in network
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_192

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0004809	obsolete tRNA (guanine-N2-)-methyltransferase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002905	Trm1	PANTHER	19	416
IPR042296	tRNA_met_Trm1_C	Gene3D	359	417
IPR029063	SAM-dependent_MTases_sf	Gene3D	18	354
IPR002905	Trm1	ProSiteProfiles	27	415
IPR002905	Trm1	Pfam	40	415
IPR029063	SAM-dependent_MTases_sf	SUPERFAMILY	33	416
IPR029063	SAM-dependent_MTases_sf	SUPERFAMILY	33	416
IPR042296	tRNA_met_Trm1_C	Gene3D	359	417
IPR002905	Trm1	ProSiteProfiles	27	415
IPR002905	Trm1	Pfam	39	415
IPR002905	Trm1	PANTHER	24	419

No CAZYmes available for this sequence

External Links

No external refs found!