Zm00001d037981_T001

Description : E3 ubiquitin ligase, putative

Gene families : OG_01_0004372 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004372_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d037981_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d037981_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_137
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_58

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	None	Extended
CC	GO:0000152	nuclear ubiquitin ligase complex	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005680	anaphase-promoting complex	ISM	GOs from InterProScan
CC	GO:0031461	cullin-RING ubiquitin ligase complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011989	ARM-like	Gene3D	967	1238
IPR049255	Apc1_N	Pfam	298	506
IPR049255	Apc1_N	Pfam	36	263
IPR024990	Apc1	PANTHER	6	1390
IPR046794	Apc1_MidN	Pfam	528	788
IPR024990	Apc1	PANTHER	3	1390
IPR024990	Apc1	Pfam	111	220
IPR011989	ARM-like	Gene3D	967	1238

No CAZYmes available for this sequence

External Links

No external refs found!