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  5. Zm00001d038104_T003

Zm00001d038104_T003


Description : glycoside hydrolase family 2 protein


Gene families : OG_01_0006063 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006063_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d038104_T003
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d038104_T003
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_116
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_125


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
MF GO:0033947 mannosylglycoprotein endo-beta-mannosidase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR023232 Glyco_hydro_2_AS ProSitePatterns 530 544
IPR013783 Ig-like_fold Gene3D 775 896
IPR006102 Glyco_hydro_2_Ig-like Pfam 289 408
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 405 775
IPR041351 Ig_GlcNase Pfam 966 1045
IPR036156 Beta-gal/glucu_dom_sf SUPERFAMILY 862 1047
IPR043534 EBDG/EBM PANTHER 7 242
IPR013783 Ig-like_fold Gene3D 288 408
IPR036156 Beta-gal/glucu_dom_sf SUPERFAMILY 775 877
IPR013783 Ig-like_fold Gene3D 961 1050
IPR036156 Beta-gal/glucu_dom_sf SUPERFAMILY 288 408
IPR008979 Galactose-bd-like_sf SUPERFAMILY 9 174
IPR013783 Ig-like_fold Gene3D 775 896
IPR043534 EBDG/EBM PANTHER 269 1047
IPR041447 Mannosidase_ig Pfam 787 870
IPR023232 Glyco_hydro_2_AS ProSitePatterns 530 544
IPR008979 Galactose-bd-like_sf SUPERFAMILY 9 174
IPR043534 EBDG/EBM PANTHER 221 242
IPR006102 Glyco_hydro_2_Ig-like Pfam 289 408
IPR043534 EBDG/EBM PANTHER 6 176
IPR036156 Beta-gal/glucu_dom_sf SUPERFAMILY 862 1047
IPR036156 Beta-gal/glucu_dom_sf SUPERFAMILY 775 877
IPR036156 Beta-gal/glucu_dom_sf SUPERFAMILY 288 408
IPR013783 Ig-like_fold Gene3D 288 408
IPR013783 Ig-like_fold Gene3D 961 1050
IPR041351 Ig_GlcNase Pfam 966 1045
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 405 775
HMM Family HMM Length Query Length e-Value Query Start Query End
GH2 752 1055 4.5e-77 41 842
No external refs found!