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  5. Zm00001d038288_T001

Zm00001d038288_T001


Description : Duplicated homeodomain-like superfamily protein


Gene families : OG_01_0014877 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014877_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d038288_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d038288_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_189
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_68


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR009057 Homeobox-like_sf SUPERFAMILY 112 166
IPR017884 SANT_dom ProSiteProfiles 113 166
IPR001005 SANT/Myb CDD 117 162
IPR017930 Myb_dom ProSiteProfiles 110 166
IPR009057 Homeobox-like_sf SUPERFAMILY 21 75
IPR006447 Myb_dom_plants NCBIfam 114 165
IPR001005 SANT/Myb ProSiteProfiles 110 162
IPR001005 SANT/Myb ProSiteProfiles 22 69
IPR001005 SANT/Myb SMART 114 164
IPR001005 SANT/Myb SMART 19 71
IPR001005 SANT/Myb Pfam 116 162
IPR001005 SANT/Myb ProSiteProfiles 22 69
IPR001005 SANT/Myb ProSiteProfiles 110 162
IPR009057 Homeobox-like_sf SUPERFAMILY 21 75
IPR017930 Myb_dom Pfam 117 161
IPR006447 Myb_dom_plants TIGRFAM 114 165
IPR001005 SANT/Myb SMART 114 164
IPR001005 SANT/Myb SMART 19 71
IPR009057 Homeobox-like_sf SUPERFAMILY 112 166
IPR017884 SANT_dom ProSiteProfiles 113 166
IPR001005 SANT/Myb CDD 117 162
IPR017930 Myb_dom ProSiteProfiles 110 166

No CAZYmes available for this sequence

No external refs found!