Zm00001d038648_T005

Description : calreticulin 3

Gene families : OG_01_0006842 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006842_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d038648_T005
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d038648_T005
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_207
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_138

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	ISM	GOs from InterProScan
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005783	endoplasmic reticulum	ISM	GOs from InterProScan
BP	GO:0006457	protein folding	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0051082	unfolded protein binding	ISM	GOs from InterProScan
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001580	Calret/calnex	PANTHER	16	418
IPR009169	Calreticulin	PIRSF	8	336
IPR009169	Calreticulin	PIRSF	325	448
IPR009033	Calreticulin/calnexin_P_dom_sf	Gene3D	216	312
IPR018124	Calret/calnex_CS	ProSitePatterns	105	120
IPR001580	Calret/calnex	PRINTS	133	149
IPR001580	Calret/calnex	PRINTS	107	125
IPR001580	Calret/calnex	PRINTS	250	272
IPR001580	Calret/calnex	PRINTS	222	235
IPR001580	Calret/calnex	PRINTS	353	373
IPR013320	ConA-like_dom_sf	SUPERFAMILY	22	224
IPR009033	Calreticulin/calnexin_P_dom_sf	SUPERFAMILY	208	312
IPR001580	Calret/calnex	Pfam	30	265
IPR001580	Calret/calnex	Pfam	267	305
IPR009033	Calreticulin/calnexin_P_dom_sf	SUPERFAMILY	208	312
IPR001580	Calret/calnex	Pfam	30	265
IPR001580	Calret/calnex	Pfam	267	305
IPR001580	Calret/calnex	PANTHER	4	452
IPR018124	Calret/calnex_CS	ProSitePatterns	105	120
IPR009033	Calreticulin/calnexin_P_dom_sf	Gene3D	216	312
IPR001580	Calret/calnex	PRINTS	133	149
IPR001580	Calret/calnex	PRINTS	107	125
IPR001580	Calret/calnex	PRINTS	250	272
IPR001580	Calret/calnex	PRINTS	222	235
IPR001580	Calret/calnex	PRINTS	353	373
IPR009169	Calreticulin	PIRSF	325	448
IPR009169	Calreticulin	PIRSF	8	336
IPR013320	ConA-like_dom_sf	SUPERFAMILY	22	224

No CAZYmes available for this sequence

External Links

No external refs found!