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  5. Sevir.2G115400.1

Sevir.2G115400.1


Description : DEA(D/H)-box RNA helicase family protein


Gene families : OG_01_0010796 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010796_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.2G115400.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.2G115400.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_7
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_48


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0005524 ATP binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000629 RNA-helicase_DEAD-box_CS ProSitePatterns 248 256
IPR027417 P-loop_NTPase Gene3D 71 306
IPR014001 Helicase_ATP-bd ProSiteProfiles 125 302
IPR001650 Helicase_C Pfam 330 439
IPR001650 Helicase_C ProSiteProfiles 315 478
IPR027417 P-loop_NTPase Gene3D 307 481
IPR014001 Helicase_ATP-bd SMART 113 319
IPR011545 DEAD/DEAH_box_helicase_dom Pfam 119 290
IPR001650 Helicase_C SMART 358 439
IPR027417 P-loop_NTPase SUPERFAMILY 170 452

No CAZYmes available for this sequence

No external refs found!