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  5. Zm00001d038734_T003

Zm00001d038734_T003


Description : CLP protease regulatory subunit X


Gene families : OG_01_0002476 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002476_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d038734_T003
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d038734_T003
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_150
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_682


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0006457 protein folding ISM GOs from InterProScan
MF GO:0016887 ATP hydrolysis activity ISM GOs from InterProScan
MF GO:0051082 unfolded protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR019489 Clp_ATPase_C SMART 320 416
IPR003593 AAA+_ATPase SMART 101 233
IPR004487 Clp_protease_ATP-bd_su_ClpX NCBIfam 36 407
IPR027417 P-loop_NTPase Gene3D 33 318
IPR027417 P-loop_NTPase SUPERFAMILY 37 407
IPR003959 ATPase_AAA_core Pfam 101 211
IPR019489 Clp_ATPase_C Pfam 340 394
IPR003959 ATPase_AAA_core Pfam 101 211
IPR003593 AAA+_ATPase SMART 101 233
IPR004487 Clp_protease_ATP-bd_su_ClpX TIGRFAM 36 407
IPR019489 Clp_ATPase_C SMART 320 416
IPR027417 P-loop_NTPase SUPERFAMILY 37 407
IPR019489 Clp_ATPase_C Pfam 339 395
IPR027417 P-loop_NTPase Gene3D 33 318

No CAZYmes available for this sequence

No external refs found!