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  5. Zm00001d038812_T005

Zm00001d038812_T005


Description : Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain


Gene families : OG_01_0005771 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005771_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d038812_T005
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d038812_T005
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_288
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_257


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR045876 PRHA-like_PHD-finger CDD 211 263
IPR019787 Znf_PHD-finger Pfam 212 263
IPR011011 Znf_FYVE_PHD SUPERFAMILY 201 269
IPR019786 Zinc_finger_PHD-type_CS ProSitePatterns 212 263
IPR001356 Homeobox_dom Pfam 580 620
IPR001356 Homeobox_dom SMART 568 630
IPR013083 Znf_RING/FYVE/PHD Gene3D 191 263
IPR009057 Homeobox-like_sf SUPERFAMILY 567 621
IPR001356 Homeobox_dom ProSiteProfiles 566 626
IPR001965 Znf_PHD SMART 211 264
IPR019787 Znf_PHD-finger ProSiteProfiles 209 266
IPR001356 Homeobox_dom CDD 569 620
IPR011011 Znf_FYVE_PHD SUPERFAMILY 201 269
IPR045876 PRHA-like_PHD-finger CDD 211 263
IPR001356 Homeobox_dom ProSiteProfiles 566 626
IPR001356 Homeobox_dom CDD 569 620
IPR001356 Homeobox_dom SMART 568 630
IPR019787 Znf_PHD-finger ProSiteProfiles 209 266
IPR019786 Zinc_finger_PHD-type_CS ProSitePatterns 212 263
IPR013083 Znf_RING/FYVE/PHD Gene3D 191 263
IPR001965 Znf_PHD SMART 211 264
IPR009057 Homeobox-like_sf SUPERFAMILY 567 621
IPR019787 Znf_PHD-finger Pfam 211 266
IPR001356 Homeobox_dom Pfam 581 620

No CAZYmes available for this sequence

No external refs found!