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Description : Transducin/WD40 repeat-like superfamily protein
Gene families : OG_01_0005477 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005477_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d039046_T006 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d039046_T006 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_221 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_208 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 5 | 254 |
| IPR045227 | WDR18/Ipi3/RID3 | PANTHER | 8 | 419 |
| IPR019775 | WD40_repeat_CS | ProSitePatterns | 140 | 154 |
| IPR001680 | WD40_rpt | Pfam | 117 | 153 |
| IPR001680 | WD40_rpt | Pfam | 171 | 205 |
| IPR001680 | WD40_rpt | Pfam | 262 | 297 |
| IPR019775 | WD40_repeat_CS | ProSitePatterns | 284 | 298 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 284 | 298 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 140 | 154 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 192 | 206 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 88 | 122 |
| IPR001680 | WD40_rpt | SMART | 167 | 205 |
| IPR001680 | WD40_rpt | SMART | 258 | 297 |
| IPR001680 | WD40_rpt | SMART | 76 | 113 |
| IPR001680 | WD40_rpt | SMART | 208 | 246 |
| IPR001680 | WD40_rpt | SMART | 116 | 153 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 123 | 154 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 265 | 306 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 12 | 318 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 255 | 322 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 5 | 254 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 123 | 154 |
| IPR019775 | WD40_repeat_CS | ProSitePatterns | 284 | 298 |
| IPR019775 | WD40_repeat_CS | ProSitePatterns | 140 | 154 |
| IPR001680 | WD40_rpt | Pfam | 262 | 297 |
| IPR001680 | WD40_rpt | Pfam | 171 | 205 |
| IPR001680 | WD40_rpt | Pfam | 117 | 153 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 265 | 306 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 255 | 322 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 284 | 298 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 140 | 154 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 192 | 206 |
| IPR001680 | WD40_rpt | SMART | 167 | 205 |
| IPR001680 | WD40_rpt | SMART | 76 | 113 |
| IPR001680 | WD40_rpt | SMART | 258 | 297 |
| IPR001680 | WD40_rpt | SMART | 208 | 246 |
| IPR001680 | WD40_rpt | SMART | 116 | 153 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 88 | 122 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 12 | 318 |
| IPR045227 | WDR18/Ipi3/RID3 | PANTHER | 6 | 356 |
No CAZYmes available for this sequence
| No external refs found! |