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  5. Zm00001d039214_T025

Zm00001d039214_T025


Description : Argonaute family protein


Gene families : OG_01_0000282 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000282_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d039214_T025
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d039214_T025
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_206
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_105


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR012337 RNaseH-like_sf SUPERFAMILY 561 881
IPR003100 PAZ_dom ProSiteProfiles 335 409
IPR003165 Piwi SMART 578 884
IPR032472 ArgoL2 Pfam 435 480
IPR014811 ArgoL1 SMART 241 293
IPR003100 PAZ_dom Pfam 297 425
IPR014811 ArgoL1 Pfam 243 292
IPR045246 Piwi_ago-like CDD 453 883
IPR032474 Argonaute_N Pfam 70 231
IPR003165 Piwi ProSiteProfiles 578 884
IPR036397 RNaseH_sf Gene3D 645 924
IPR032473 Argonaute_Mid_dom Pfam 490 570
IPR003165 Piwi Pfam 579 882
IPR036085 PAZ_dom_sf SUPERFAMILY 288 449
IPR003165 Piwi Pfam 579 882
IPR003165 Piwi ProSiteProfiles 578 884
IPR003100 PAZ_dom Pfam 297 425
IPR036397 RNaseH_sf Gene3D 645 924
IPR003165 Piwi SMART 578 884
IPR003100 PAZ_dom ProSiteProfiles 335 409
IPR014811 ArgoL1 Pfam 243 291
IPR014811 ArgoL1 SMART 241 293
IPR032472 ArgoL2 Pfam 435 480
IPR032473 Argonaute_Mid_dom Pfam 490 570
IPR012337 RNaseH-like_sf SUPERFAMILY 561 881
IPR045246 Piwi_ago-like CDD 453 883
IPR036085 PAZ_dom_sf SUPERFAMILY 288 449
IPR032474 Argonaute_N Pfam 70 231

No CAZYmes available for this sequence

No external refs found!