Zm00001d039302_T001

Description : Transducin/WD40 repeat-like superfamily protein

Gene families : OG_01_0017708 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0017708_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d039302_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d039302_T001	No neighbors in network
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_196

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001680	WD40_rpt	ProSiteProfiles	1085	1123
IPR003613	Ubox_domain	ProSiteProfiles	362	437
IPR001680	WD40_rpt	Pfam	1087	1118
IPR013083	Znf_RING/FYVE/PHD	Gene3D	363	436
IPR003613	Ubox_domain	Pfam	364	435
IPR001680	WD40_rpt	SMART	1165	1198
IPR001680	WD40_rpt	SMART	1299	1337
IPR001680	WD40_rpt	SMART	1077	1119
IPR003613	Ubox_domain	SMART	366	430
IPR016024	ARM-type_fold	SUPERFAMILY	558	964
IPR045210	RING-Ubox_PUB	CDD	364	416
IPR015943	WD40/YVTN_repeat-like_dom_sf	Gene3D	1063	1341
IPR036322	WD40_repeat_dom_sf	SUPERFAMILY	1083	1335
IPR013083	Znf_RING/FYVE/PHD	Gene3D	363	436
IPR045210	RING-Ubox_PUB	CDD	367	409
IPR003613	Ubox_domain	Pfam	364	435
IPR001680	WD40_rpt	SMART	1165	1198
IPR001680	WD40_rpt	SMART	1299	1337
IPR001680	WD40_rpt	SMART	1077	1119
IPR015943	WD40/YVTN_repeat-like_dom_sf	Gene3D	1063	1341
IPR016024	ARM-type_fold	SUPERFAMILY	558	964
IPR003613	Ubox_domain	SMART	366	430
IPR001680	WD40_rpt	ProSiteProfiles	1085	1123
IPR003613	Ubox_domain	ProSiteProfiles	362	437
IPR036322	WD40_repeat_dom_sf	SUPERFAMILY	1083	1335

No CAZYmes available for this sequence

External Links

No external refs found!