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  5. Zm00001d039362_T002

Zm00001d039362_T002


Description : tetratricopetide-repeat thioredoxin-like 1


Gene families : OG_01_0004048 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004048_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d039362_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d039362_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_252
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_268


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR019734 TPR_repeat SMART 198 231
IPR019734 TPR_repeat SMART 266 299
IPR019734 TPR_repeat SMART 504 537
IPR019734 TPR_repeat SMART 436 469
IPR019734 TPR_repeat SMART 232 265
IPR019734 TPR_repeat SMART 342 375
IPR019734 TPR_repeat SMART 470 503
IPR019734 TPR_repeat SMART 390 423
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 197 426
IPR019734 TPR_repeat ProSiteProfiles 198 231
IPR001440 TPR_1 Pfam 472 503
IPR013105 TPR_2 Pfam 203 231
IPR036249 Thioredoxin-like_sf SUPERFAMILY 474 660
IPR044534 TTL1-4 PANTHER 46 662
IPR011990 TPR-like_helical_dom_sf Gene3D 196 556
IPR013766 Thioredoxin_domain Pfam 586 656
IPR036249 Thioredoxin-like_sf SUPERFAMILY 474 660
IPR019734 TPR_repeat ProSiteProfiles 198 231
IPR013766 Thioredoxin_domain Pfam 586 656
IPR001440 TPR_1 Pfam 472 503
IPR044534 TTL1-4 PANTHER 5 669
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 197 426
IPR019734 TPR_repeat SMART 198 231
IPR019734 TPR_repeat SMART 266 299
IPR019734 TPR_repeat SMART 504 537
IPR019734 TPR_repeat SMART 436 469
IPR019734 TPR_repeat SMART 232 265
IPR019734 TPR_repeat SMART 342 375
IPR019734 TPR_repeat SMART 470 503
IPR019734 TPR_repeat SMART 390 423
IPR011990 TPR-like_helical_dom_sf Gene3D 196 556

No CAZYmes available for this sequence

No external refs found!