1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001d039404_T001

Zm00001d039404_T001


Description : syntaxin of plants 43


Gene families : OG_01_0001168 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001168_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d039404_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d039404_T001 No neighbors in network
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_252


Type GO Term Name Evidence Source
MF GO:0005484 SNAP receptor activity ISM GOs from InterProScan
BP GO:0006886 intracellular protein transport ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
BP GO:0016192 vesicle-mediated transport ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000727 T_SNARE_dom ProSiteProfiles 227 289
IPR010989 SNARE SUPERFAMILY 73 282
IPR006012 Syntaxin/epimorphin_CS ProSitePatterns 233 272
IPR000727 T_SNARE_dom SMART 222 289
IPR045242 Syntaxin PANTHER 84 310
IPR000727 T_SNARE_dom Pfam 263 315
IPR006011 Syntaxin_N SMART 68 183
IPR010989 SNARE SUPERFAMILY 73 282
IPR000727 T_SNARE_dom ProSiteProfiles 227 289
IPR000727 T_SNARE_dom Pfam 263 315
IPR006012 Syntaxin/epimorphin_CS ProSitePatterns 233 272
IPR000727 T_SNARE_dom SMART 222 289
IPR006011 Syntaxin_N SMART 68 183
IPR045242 Syntaxin PANTHER 1 318

No CAZYmes available for this sequence

No external refs found!