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  5. Zm00001d039530_T001

Zm00001d039530_T001


Description : PAS/LOV protein B


Gene families : OG_01_0001458 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001458_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d039530_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d039530_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_37
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_51


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000014 PAS CDD 55 142
IPR035965 PAS-like_dom_sf SUPERFAMILY 266 361
IPR000014 PAS ProSiteProfiles 28 77
IPR001610 PAC SMART 105 148
IPR001610 PAC SMART 323 365
IPR000014 PAS ProSiteProfiles 273 293
IPR035965 PAS-like_dom_sf SUPERFAMILY 45 142
IPR000014 PAS NCBIfam 273 356
IPR000014 PAS NCBIfam 55 140
IPR000014 PAS Pfam 269 362
IPR000014 PAS Pfam 52 143
IPR000014 PAS CDD 273 362
IPR000014 PAS Pfam 269 362
IPR000014 PAS Pfam 51 142
IPR035965 PAS-like_dom_sf SUPERFAMILY 45 142
IPR035965 PAS-like_dom_sf SUPERFAMILY 266 361
IPR000014 PAS CDD 273 362
IPR000014 PAS CDD 55 142
IPR000014 PAS ProSiteProfiles 273 293
IPR001610 PAC SMART 105 148
IPR001610 PAC SMART 323 365
IPR000014 PAS TIGRFAM 55 140
IPR000014 PAS TIGRFAM 273 356
IPR000014 PAS ProSiteProfiles 28 77

No CAZYmes available for this sequence

No external refs found!