Zm00001d039706_T001

Description : RING/U-box superfamily protein

Gene families : OG_01_0002141 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002141_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d039706_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d039706_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_37
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_12

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009894	regulation of catabolic process	None	Extended
BP	GO:0009896	positive regulation of catabolic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0030162	regulation of proteolysis	None	Extended
BP	GO:0042176	regulation of protein catabolic process	None	Extended
BP	GO:0045732	positive regulation of protein catabolic process	None	Extended
BP	GO:0045862	positive regulation of proteolysis	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048584	positive regulation of response to stimulus	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051247	positive regulation of protein metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0061136	regulation of proteasomal protein catabolic process	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	ISM	GOs from InterProScan
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901800	positive regulation of proteasomal protein catabolic process	None	Extended
BP	GO:1903050	regulation of proteolysis involved in protein catabolic process	None	Extended
BP	GO:1903052	positive regulation of proteolysis involved in protein catabolic process	None	Extended
BP	GO:1904292	regulation of ERAD pathway	None	Extended
BP	GO:1904294	positive regulation of ERAD pathway	ISM	GOs from InterProScan
BP	GO:1905897	regulation of response to endoplasmic reticulum stress	None	Extended
BP	GO:1905898	positive regulation of response to endoplasmic reticulum stress	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR017907	Znf_RING_CS	ProSitePatterns	454	463
IPR001841	Znf_RING	SMART	439	476
IPR001841	Znf_RING	Pfam	438	477
IPR001841	Znf_RING	ProSiteProfiles	439	477
IPR044235	RNFT1/2	PANTHER	86	500
IPR013083	Znf_RING/FYVE/PHD	Gene3D	417	487
IPR044235	RNFT1/2	PANTHER	102	161
IPR017907	Znf_RING_CS	ProSitePatterns	454	463
IPR001841	Znf_RING	ProSiteProfiles	439	477
IPR044235	RNFT1/2	PANTHER	173	500
IPR013083	Znf_RING/FYVE/PHD	Gene3D	417	487
IPR001841	Znf_RING	SMART	439	476

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d039706_T001

Expression Profile

Co-expression Networks

Functional Annotation