Zm00001d039940_T001

Description : GTP binding Elongation factor Tu family protein

Gene families : OG_01_0152840 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0152840_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d039940_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d039940_T001	No neighbors in network
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_208

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	ISM	GOs from InterProScan
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006338	chromatin remodeling	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
BP	GO:0031507	heterochromatin formation	ISM	GOs from InterProScan
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0040029	epigenetic regulation of gene expression	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0045814	negative regulation of gene expression, epigenetic	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070828	heterochromatin organization	None	Extended
BP	GO:0071824	protein-DNA complex organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000795	T_Tr_GTP-bd_dom	Pfam	138	172
IPR027417	P-loop_NTPase	Gene3D	124	182
IPR027417	P-loop_NTPase	SUPERFAMILY	135	172
IPR039322	MOM1	PANTHER	230	412
IPR027417	P-loop_NTPase	Gene3D	124	182
IPR039322	MOM1	PANTHER	1	412
IPR000795	T_Tr_GTP-bd_dom	Pfam	138	171
IPR027417	P-loop_NTPase	SUPERFAMILY	135	172

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d039940_T001

Expression Profile

Co-expression Networks

Functional Annotation