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  5. Zm00001d039946_T001

Zm00001d039946_T001


Description : glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein


Gene families : OG_01_0004268 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004268_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d039946_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d039946_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_191
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_229


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001000 GH10_dom SMART 111 361
IPR001000 GH10_dom Pfam 75 354
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 64 367
IPR001000 GH10_dom PRINTS 224 235
IPR001000 GH10_dom PRINTS 142 154
IPR001000 GH10_dom PRINTS 256 268
IPR001000 GH10_dom ProSiteProfiles 68 360
IPR044846 GH10 PANTHER 40 410
IPR001000 GH10_dom PRINTS 224 235
IPR001000 GH10_dom PRINTS 142 154
IPR001000 GH10_dom PRINTS 256 268
IPR044846 GH10 PANTHER 46 417
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 64 367
IPR001000 GH10_dom SMART 111 361
IPR001000 GH10_dom Pfam 74 350
IPR001000 GH10_dom ProSiteProfiles 68 360
HMM Family HMM Length Query Length e-Value Query Start Query End
GH10 303 418 2e-72 71 359
No external refs found!