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  5. Zm00001d040122_T001

Zm00001d040122_T001


Description : spermidine synthase 2


Gene families : OG_01_0000152 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000152_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d040122_T001 No neighbors in network
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d040122_T001
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_68


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR029063 SAM-dependent_MTases_sf Gene3D 167 240
IPR029063 SAM-dependent_MTases_sf SUPERFAMILY 147 240
IPR037163 Spermidine_synt_N_sf Gene3D 145 166
IPR030374 PABS ProSiteProfiles 149 240
IPR001045 Spermi_synthase PANTHER 148 240
IPR035246 Spermidine_synt_N Pfam 149 167
IPR001045 Spermi_synthase PANTHER 148 240
IPR029063 SAM-dependent_MTases_sf SUPERFAMILY 147 240
IPR037163 Spermidine_synt_N_sf Gene3D 145 166
IPR035246 Spermidine_synt_N Pfam 149 167
IPR030374 PABS ProSiteProfiles 149 240

No CAZYmes available for this sequence

No external refs found!