Zm00001d040163_T001

Description : 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Gene families : OG_01_0004417 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004417_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d040163_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d040163_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_176
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_203

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	ISM	GOs from InterProScan
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0030604	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	ISM	GOs from InterProScan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
MF	GO:0046872	metal ion binding	ISM	GOs from InterProScan
MF	GO:0050661	NADP binding	None	Extended
MF	GO:0070402	NADPH binding	ISM	GOs from InterProScan
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR026877	DXPR_C	Pfam	336	458
IPR036291	NAD(P)-bd_dom_sf	SUPERFAMILY	75	243
IPR013512	DXP_reductoisomerase_N	Pfam	109	225
IPR036169	DXPR_C_sf	SUPERFAMILY	369	462
IPR003821	DXP_reductoisomerase	PANTHER	109	463
IPR003821	DXP_reductoisomerase	PIRSF	75	105
IPR003821	DXP_reductoisomerase	PIRSF	106	257
IPR003821	DXP_reductoisomerase	PIRSF	254	468
IPR013644	DXP_reductoisomerase_C	Pfam	257	304
IPR003821	DXP_reductoisomerase	Hamap	78	462
IPR026877	DXPR_C	Pfam	336	457
IPR013644	DXP_reductoisomerase_C	Pfam	239	304
IPR003821	DXP_reductoisomerase	PIRSF	106	257
IPR003821	DXP_reductoisomerase	PIRSF	75	105
IPR003821	DXP_reductoisomerase	PIRSF	254	468
IPR013512	DXP_reductoisomerase_N	Pfam	109	225
IPR036169	DXPR_C_sf	SUPERFAMILY	369	462
IPR003821	DXP_reductoisomerase	Hamap	78	462
IPR036291	NAD(P)-bd_dom_sf	SUPERFAMILY	75	243
IPR003821	DXP_reductoisomerase	PANTHER	9	465

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d040163_T001

Expression Profile

Co-expression Networks

Functional Annotation