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  5. Zm00001d040274_T001

Zm00001d040274_T001


Description : importin alpha isoform 1


Gene families : OG_01_0001840 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001840_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d040274_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d040274_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_165
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_90


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
CC GO:0005737 cytoplasm ISM GOs from InterProScan
BP GO:0006606 protein import into nucleus ISM GOs from InterProScan
MF GO:0061608 nuclear import signal receptor activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR024931 Importin_alpha PIRSF 2 528
IPR000225 Armadillo SMART 401 441
IPR000225 Armadillo SMART 358 398
IPR000225 Armadillo SMART 229 268
IPR000225 Armadillo SMART 144 184
IPR000225 Armadillo SMART 315 356
IPR000225 Armadillo SMART 270 313
IPR000225 Armadillo SMART 101 142
IPR000225 Armadillo SMART 186 227
IPR000225 Armadillo ProSiteProfiles 155 197
IPR011989 ARM-like Gene3D 69 495
IPR016024 ARM-type_fold SUPERFAMILY 13 499
IPR000225 Armadillo ProSiteProfiles 112 155
IPR002652 Importin-a_IBB ProSiteProfiles 1 58
IPR000225 Armadillo Pfam 144 183
IPR000225 Armadillo Pfam 240 268
IPR000225 Armadillo Pfam 358 397
IPR000225 Armadillo Pfam 186 227
IPR000225 Armadillo Pfam 315 356
IPR000225 Armadillo Pfam 102 142
IPR000225 Armadillo Pfam 271 312
IPR000225 Armadillo Pfam 401 440
IPR000225 Armadillo ProSiteProfiles 326 369
IPR032413 Arm_3 Pfam 456 502
IPR000225 Armadillo ProSiteProfiles 239 281
IPR002652 Importin-a_IBB Pfam 12 91
IPR036975 Importin-a_IBB_sf Gene3D 11 50
IPR002652 Importin-a_IBB ProSiteProfiles 1 58
IPR000225 Armadillo SMART 401 441
IPR000225 Armadillo SMART 229 268
IPR000225 Armadillo SMART 358 398
IPR000225 Armadillo SMART 144 184
IPR000225 Armadillo SMART 101 142
IPR000225 Armadillo SMART 315 356
IPR000225 Armadillo SMART 270 313
IPR000225 Armadillo SMART 186 227
IPR000225 Armadillo Pfam 144 183
IPR000225 Armadillo Pfam 102 142
IPR000225 Armadillo Pfam 315 356
IPR000225 Armadillo Pfam 240 267
IPR000225 Armadillo Pfam 271 312
IPR000225 Armadillo Pfam 358 397
IPR000225 Armadillo Pfam 402 439
IPR000225 Armadillo Pfam 186 227
IPR000225 Armadillo ProSiteProfiles 239 281
IPR002652 Importin-a_IBB Pfam 12 91
IPR036975 Importin-a_IBB_sf Gene3D 11 50
IPR016024 ARM-type_fold SUPERFAMILY 13 499
IPR000225 Armadillo ProSiteProfiles 326 369
IPR032413 Arm_3 Pfam 456 503
IPR000225 Armadillo ProSiteProfiles 155 197
IPR000225 Armadillo ProSiteProfiles 112 155
IPR011989 ARM-like Gene3D 69 495
IPR024931 Importin_alpha PIRSF 2 528

No CAZYmes available for this sequence

No external refs found!