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Description : Zinc finger C-x8-C-x5-C-x3-H type family protein
Gene families : OG_01_0008757 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008757_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d040301_T001 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d040301_T001 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_257 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_252 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046872 | metal ion binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR036855 | Znf_CCCH_sf | SUPERFAMILY | 337 | 363 |
| IPR000571 | Znf_CCCH | Pfam | 138 | 162 |
| IPR000571 | Znf_CCCH | Pfam | 337 | 362 |
| IPR000571 | Znf_CCCH | Pfam | 92 | 118 |
| IPR000571 | Znf_CCCH | Pfam | 45 | 70 |
| IPR000571 | Znf_CCCH | Pfam | 290 | 316 |
| IPR036855 | Znf_CCCH_sf | SUPERFAMILY | 293 | 316 |
| IPR036855 | Znf_CCCH_sf | SUPERFAMILY | 94 | 119 |
| IPR000571 | Znf_CCCH | ProSiteProfiles | 91 | 119 |
| IPR036855 | Znf_CCCH_sf | SUPERFAMILY | 137 | 162 |
| IPR000571 | Znf_CCCH | ProSiteProfiles | 43 | 71 |
| IPR000571 | Znf_CCCH | ProSiteProfiles | 335 | 363 |
| IPR000571 | Znf_CCCH | ProSiteProfiles | 289 | 317 |
| IPR000571 | Znf_CCCH | ProSiteProfiles | 135 | 163 |
| IPR000571 | Znf_CCCH | SMART | 289 | 316 |
| IPR000571 | Znf_CCCH | SMART | 335 | 362 |
| IPR000571 | Znf_CCCH | SMART | 91 | 118 |
| IPR000571 | Znf_CCCH | SMART | 43 | 70 |
| IPR000571 | Znf_CCCH | SMART | 135 | 162 |
| IPR036855 | Znf_CCCH_sf | SUPERFAMILY | 47 | 71 |
| IPR000571 | Znf_CCCH | ProSiteProfiles | 289 | 317 |
| IPR000571 | Znf_CCCH | ProSiteProfiles | 335 | 363 |
| IPR000571 | Znf_CCCH | ProSiteProfiles | 135 | 163 |
| IPR036855 | Znf_CCCH_sf | SUPERFAMILY | 94 | 119 |
| IPR036855 | Znf_CCCH_sf | SUPERFAMILY | 137 | 162 |
| IPR000571 | Znf_CCCH | Pfam | 337 | 362 |
| IPR000571 | Znf_CCCH | Pfam | 291 | 316 |
| IPR000571 | Znf_CCCH | Pfam | 138 | 162 |
| IPR000571 | Znf_CCCH | Pfam | 45 | 70 |
| IPR000571 | Znf_CCCH | Pfam | 93 | 118 |
| IPR000571 | Znf_CCCH | ProSiteProfiles | 43 | 71 |
| IPR000571 | Znf_CCCH | SMART | 289 | 316 |
| IPR000571 | Znf_CCCH | SMART | 335 | 362 |
| IPR000571 | Znf_CCCH | SMART | 91 | 118 |
| IPR000571 | Znf_CCCH | SMART | 43 | 70 |
| IPR000571 | Znf_CCCH | SMART | 135 | 162 |
| IPR036855 | Znf_CCCH_sf | SUPERFAMILY | 47 | 71 |
| IPR000571 | Znf_CCCH | ProSiteProfiles | 91 | 119 |
| IPR036855 | Znf_CCCH_sf | SUPERFAMILY | 337 | 363 |
| IPR036855 | Znf_CCCH_sf | SUPERFAMILY | 293 | 316 |
No CAZYmes available for this sequence
| No external refs found! |