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  5. Zm00001d040302_T005

Zm00001d040302_T005


Description : Zinc finger C-x8-C-x5-C-x3-H type family protein


Gene families : OG_01_0006777 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006777_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d040302_T005
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d040302_T005
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_222
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_264


Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000571 Znf_CCCH ProSiteProfiles 353 381
IPR000571 Znf_CCCH ProSiteProfiles 155 183
IPR036855 Znf_CCCH_sf SUPERFAMILY 158 182
IPR000571 Znf_CCCH ProSiteProfiles 110 138
IPR000571 Znf_CCCH ProSiteProfiles 307 335
IPR000571 Znf_CCCH ProSiteProfiles 61 89
IPR036855 Znf_CCCH_sf SUPERFAMILY 65 89
IPR036855 Znf_CCCH_sf SUPERFAMILY 354 382
IPR000571 Znf_CCCH Pfam 157 182
IPR000571 Znf_CCCH Pfam 308 334
IPR000571 Znf_CCCH Pfam 112 137
IPR000571 Znf_CCCH Pfam 63 88
IPR000571 Znf_CCCH Pfam 357 380
IPR000571 Znf_CCCH SMART 353 380
IPR000571 Znf_CCCH SMART 155 182
IPR000571 Znf_CCCH SMART 307 334
IPR000571 Znf_CCCH SMART 110 137
IPR000571 Znf_CCCH SMART 61 88
IPR036855 Znf_CCCH_sf SUPERFAMILY 311 335
IPR036855 Znf_CCCH_sf SUPERFAMILY 113 139
IPR036855 Znf_CCCH_sf SUPERFAMILY 311 335
IPR000571 Znf_CCCH Pfam 112 137
IPR000571 Znf_CCCH Pfam 357 380
IPR000571 Znf_CCCH Pfam 309 334
IPR000571 Znf_CCCH Pfam 157 182
IPR000571 Znf_CCCH Pfam 63 88
IPR036855 Znf_CCCH_sf SUPERFAMILY 65 89
IPR036855 Znf_CCCH_sf SUPERFAMILY 354 382
IPR000571 Znf_CCCH ProSiteProfiles 110 138
IPR036855 Znf_CCCH_sf SUPERFAMILY 113 139
IPR000571 Znf_CCCH ProSiteProfiles 307 335
IPR000571 Znf_CCCH ProSiteProfiles 61 89
IPR000571 Znf_CCCH SMART 353 380
IPR000571 Znf_CCCH SMART 155 182
IPR000571 Znf_CCCH SMART 307 334
IPR000571 Znf_CCCH SMART 110 137
IPR000571 Znf_CCCH SMART 61 88
IPR036855 Znf_CCCH_sf SUPERFAMILY 158 182
IPR000571 Znf_CCCH ProSiteProfiles 155 183
IPR000571 Znf_CCCH ProSiteProfiles 353 381

No CAZYmes available for this sequence

No external refs found!