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  5. Zm00001d040314_T001

Zm00001d040314_T001


Description : purin-rich alpha 1


Gene families : OG_01_0013317 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013317_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d040314_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d040314_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_236
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_4


Type GO Term Name Evidence Source
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding ISM GOs from InterProScan
MF GO:0032422 purine-rich negative regulatory element binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR006628 PUR-bd_fam PANTHER 17 297
IPR006628 PUR-bd_fam Pfam 229 285
IPR006628 PUR-bd_fam Pfam 35 163
IPR006628 PUR-bd_fam SMART 228 289
IPR006628 PUR-bd_fam SMART 36 97
IPR006628 PUR-bd_fam SMART 99 166
IPR006628 PUR-bd_fam SMART 228 289
IPR006628 PUR-bd_fam SMART 36 97
IPR006628 PUR-bd_fam SMART 99 166
IPR006628 PUR-bd_fam PANTHER 30 295
IPR006628 PUR-bd_fam Pfam 228 284
IPR006628 PUR-bd_fam Pfam 35 163

No CAZYmes available for this sequence

No external refs found!