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  5. Zm00001d040344_T001

Zm00001d040344_T001


Description : UBP1-associated protein 2A


Gene families : OG_01_0005917 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005917_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d040344_T001 No neighbors in network
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d040344_T001
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_258


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000504 RRM_dom ProSiteProfiles 125 202
IPR035979 RBD_domain_sf SUPERFAMILY 118 207
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 50 204
IPR000504 RRM_dom SMART 232 304
IPR000504 RRM_dom SMART 126 198
IPR000504 RRM_dom Pfam 233 292
IPR000504 RRM_dom Pfam 127 193
IPR035979 RBD_domain_sf SUPERFAMILY 217 332
IPR000504 RRM_dom ProSiteProfiles 231 307
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 223 335
IPR035979 RBD_domain_sf SUPERFAMILY 118 207
IPR000504 RRM_dom Pfam 233 291
IPR000504 RRM_dom Pfam 127 193
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 223 335
IPR000504 RRM_dom SMART 232 304
IPR000504 RRM_dom SMART 126 198
IPR035979 RBD_domain_sf SUPERFAMILY 217 332
IPR000504 RRM_dom ProSiteProfiles 125 202
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 50 204
IPR000504 RRM_dom ProSiteProfiles 231 307

No CAZYmes available for this sequence

No external refs found!