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  5. Zm00001d040571_T001

Zm00001d040571_T001


Description : squamosa promoter binding protein-like 1


Gene families : OG_01_0002885 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002885_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d040571_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d040571_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_184
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_219


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISM GOs from InterProScan
CC GO:0005634 nucleus ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR044817 SBP-like PANTHER 33 884
IPR004333 SBP_dom Pfam 127 200
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 650 772
IPR036893 SBP_sf Gene3D 118 188
IPR004333 SBP_dom ProSiteProfiles 124 201
IPR036893 SBP_sf SUPERFAMILY 125 206
IPR036770 Ankyrin_rpt-contain_sf Gene3D 615 787
IPR044817 SBP-like PANTHER 17 892
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 650 772
IPR004333 SBP_dom Pfam 127 200
IPR036893 SBP_sf SUPERFAMILY 125 206
IPR004333 SBP_dom ProSiteProfiles 124 201
IPR036770 Ankyrin_rpt-contain_sf Gene3D 615 787
IPR036893 SBP_sf Gene3D 118 188

No CAZYmes available for this sequence

No external refs found!