Zm00001d040582_T002

Description : glycoprotease 1

Gene families : OG_01_0013336 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013336_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d040582_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d040582_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_164
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_275

Type	GO Term	Name	Evidence	Source
BP	GO:0002949	tRNA threonylcarbamoyladenosine modification	ISM	GOs from InterProScan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006400	tRNA modification	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0070525	tRNA threonylcarbamoyladenosine metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000905	Gcp-like_dom	PANTHER	75	198
IPR017861	KAE1/TsaD	PRINTS	170	189
IPR017861	KAE1/TsaD	PRINTS	77	90
IPR017861	KAE1/TsaD	PRINTS	149	169
IPR000905	Gcp-like_dom	Pfam	96	195
IPR043129	ATPase_NBD	SUPERFAMILY	76	195
IPR000905	Gcp-like_dom	PANTHER	72	195
IPR000905	Gcp-like_dom	Pfam	96	195
IPR043129	ATPase_NBD	SUPERFAMILY	76	195
IPR017861	KAE1/TsaD	PRINTS	170	189
IPR017861	KAE1/TsaD	PRINTS	77	90
IPR017861	KAE1/TsaD	PRINTS	149	169
IPR022450	TsaD	PANTHER	72	195

No CAZYmes available for this sequence

External Links

No external refs found!