- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : ATP-citrate lyase B-1
Gene families : OG_01_0008424 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008424_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d040603_T001 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d040603_T001 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_127 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_258 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | ISM | GOs from InterProScan |
| MF | GO:0046912 | acyltransferase activity, acyl groups converted into alkyl on transfer | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR016102 | Succinyl-CoA_synth-like | Gene3D | 138 | 322 |
| IPR036291 | NAD(P)-bd_dom_sf | SUPERFAMILY | 7 | 136 |
| IPR002020 | Citrate_synthase | Pfam | 409 | 617 |
| IPR016143 | Citrate_synth-like_sm_a-sub | Gene3D | 459 | 566 |
| IPR017440 | Cit_synth/succinyl-CoA_lig_AS | ProSitePatterns | 259 | 275 |
| IPR002020 | Citrate_synthase | PANTHER | 4 | 626 |
| IPR005811 | SUCC_ACL_C | Pfam | 173 | 298 |
| IPR033847 | Citrt_syn/SCS-alpha_CS | ProSitePatterns | 174 | 203 |
| IPR036969 | Citrate_synthase_sf | SUPERFAMILY | 131 | 624 |
| IPR005811 | SUCC_ACL_C | Pfam | 174 | 298 |
| IPR036969 | Citrate_synthase_sf | SUPERFAMILY | 131 | 624 |
| IPR016102 | Succinyl-CoA_synth-like | Gene3D | 138 | 322 |
| IPR033847 | Citrt_syn/SCS-alpha_CS | ProSitePatterns | 174 | 203 |
| IPR036291 | NAD(P)-bd_dom_sf | SUPERFAMILY | 7 | 136 |
| IPR016143 | Citrate_synth-like_sm_a-sub | Gene3D | 459 | 566 |
| IPR002020 | Citrate_synthase | Pfam | 408 | 616 |
| IPR017440 | Cit_synth/succinyl-CoA_lig_AS | ProSitePatterns | 259 | 275 |
No CAZYmes available for this sequence
| No external refs found! |