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  5. Zm00001d040608_T001

Zm00001d040608_T001


Description : expansin B2


Gene families : OG_01_0025329 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0025329_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d040608_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d040608_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_321
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_14


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
BP GO:0019953 sexual reproduction ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036908 RlpA-like_sf Gene3D 31 171
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 69 175
IPR007117 Expansin_CBD ProSiteProfiles 187 268
IPR009009 RlpA-like_DPBB Pfam 87 165
IPR036749 Expansin_CBD_sf SUPERFAMILY 175 267
IPR007118 Expan_Lol_pI PRINTS 158 174
IPR007118 Expan_Lol_pI PRINTS 215 229
IPR007118 Expan_Lol_pI PRINTS 68 86
IPR007118 Expan_Lol_pI PRINTS 90 108
IPR007118 Expan_Lol_pI PRINTS 48 63
IPR007118 Expan_Lol_pI PRINTS 254 268
IPR007117 Expansin_CBD Pfam 176 257
IPR007112 Expansin/allergen_DPBB_dom SMART 86 165
IPR005795 LolPI PRINTS 125 140
IPR005795 LolPI PRINTS 224 241
IPR005795 LolPI PRINTS 194 209
IPR005795 LolPI PRINTS 244 261
IPR005795 LolPI PRINTS 88 99
IPR005795 LolPI PRINTS 108 118
IPR005795 LolPI PRINTS 147 162
IPR005795 LolPI PRINTS 178 193
IPR036749 Expansin_CBD_sf Gene3D 174 268
IPR036908 RlpA-like_sf SUPERFAMILY 40 172
IPR036908 RlpA-like_sf Gene3D 31 171
IPR005795 LolPI PRINTS 125 140
IPR005795 LolPI PRINTS 224 241
IPR005795 LolPI PRINTS 194 209
IPR005795 LolPI PRINTS 244 261
IPR005795 LolPI PRINTS 88 99
IPR005795 LolPI PRINTS 108 118
IPR005795 LolPI PRINTS 147 162
IPR005795 LolPI PRINTS 178 193
IPR007118 Expan_Lol_pI PRINTS 158 174
IPR007118 Expan_Lol_pI PRINTS 215 229
IPR007118 Expan_Lol_pI PRINTS 68 86
IPR007118 Expan_Lol_pI PRINTS 90 108
IPR007118 Expan_Lol_pI PRINTS 48 63
IPR007118 Expan_Lol_pI PRINTS 254 268
IPR007117 Expansin_CBD ProSiteProfiles 187 268
IPR007117 Expansin_CBD Pfam 176 257
IPR036749 Expansin_CBD_sf SUPERFAMILY 175 267
IPR007112 Expansin/allergen_DPBB_dom SMART 86 165
IPR009009 RlpA-like_DPBB Pfam 87 164
IPR036749 Expansin_CBD_sf Gene3D 174 268
IPR036908 RlpA-like_sf SUPERFAMILY 40 172
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 69 175

No CAZYmes available for this sequence

No external refs found!