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  5. Zm00001d040769_T001

Zm00001d040769_T001


Description : aconitase 3


Gene families : OG_01_0022398 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0022398_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d040769_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d040769_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_38
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_118


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015931 Acnase/IPM_dHydase_lsu_aba_1/3 Gene3D 6 81
IPR009091 RCC1/BLIP-II SUPERFAMILY 82 263
IPR036008 Aconitase_4Fe-4S_dom SUPERFAMILY 9 75
IPR009091 RCC1/BLIP-II Gene3D 189 274
IPR018136 Aconitase_4Fe-4S_BS ProSitePatterns 43 56
IPR001030 Acoase/IPM_deHydtase_lsu_aba Pfam 9 65
IPR015928 Aconitase/3IPM_dehydase_swvl Gene3D 85 187
IPR000573 AconitaseA/IPMdHydase_ssu_swvl Pfam 115 184
IPR006249 Aconitase/IRP2 PANTHER 10 74
IPR015931 Acnase/IPM_dHydase_lsu_aba_1/3 Gene3D 6 81
IPR036008 Aconitase_4Fe-4S_dom SUPERFAMILY 9 75
IPR018136 Aconitase_4Fe-4S_BS ProSitePatterns 43 56
IPR009091 RCC1/BLIP-II SUPERFAMILY 82 263
IPR000573 AconitaseA/IPMdHydase_ssu_swvl Pfam 115 184
IPR006249 Aconitase/IRP2 PANTHER 10 74
IPR006249 Aconitase/IRP2 PANTHER 87 274
IPR015928 Aconitase/3IPM_dehydase_swvl Gene3D 85 187
IPR009091 RCC1/BLIP-II Gene3D 189 274
IPR001030 Acoase/IPM_deHydtase_lsu_aba Pfam 9 64

No CAZYmes available for this sequence

No external refs found!