Zm00001d040832_T001

Description : transcription regulators

Gene families : OG_01_0000198 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000198_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d040832_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d040832_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_161
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_68

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006417	regulation of translation	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010608	post-transcriptional regulation of gene expression	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0017148	negative regulation of translation	ISM	GOs from InterProScan
BP	GO:0019222	regulation of metabolic process	None	Extended
CC	GO:0030015	CCR4-NOT core complex	ISM	GOs from InterProScan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034248	regulation of amide metabolic process	None	Extended
BP	GO:0034249	negative regulation of amide metabolic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051248	negative regulation of protein metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR040398	Not1	PANTHER	23	176
IPR014722	Rib_uL2_dom2	Gene3D	475	506
IPR032191	CNOT1_CAF1_bind	Pfam	42	176
IPR032191	CNOT1_CAF1_bind	Pfam	201	268
IPR041982	Ribosomal_eS4_KOW	CDD	477	504
IPR032191	CNOT1_CAF1_bind	Pfam	42	176
IPR032191	CNOT1_CAF1_bind	Pfam	201	268
IPR040398	Not1	PANTHER	285	490
IPR040398	Not1	PANTHER	205	268
IPR040398	Not1	PANTHER	19	191
IPR014722	Rib_uL2_dom2	Gene3D	475	506
IPR041982	Ribosomal_eS4_KOW	CDD	477	504

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d040832_T001

Expression Profile

Co-expression Networks

Functional Annotation