Zm00001d040850_T003

Description : dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative

Gene families : OG_01_0007940 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007940_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d040850_T003
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d040850_T003
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_127
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_125

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISM	GOs from InterProScan
MF	GO:0003855	3-dehydroquinate dehydratase activity	ISM	GOs from InterProScan
MF	GO:0004764	shikimate 3-dehydrogenase (NADP+) activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016835	carbon-oxygen lyase activity	None	Extended
MF	GO:0016836	hydro-lyase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019632	shikimate metabolic process	ISM	GOs from InterProScan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
MF	GO:0050661	NADP binding	ISM	GOs from InterProScan
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR006151	Shikm_DH/Glu-tRNA_Rdtase	Pfam	354	414
IPR001381	DHquinase_I	NCBIfam	4	221
IPR001381	DHquinase_I	Hamap	3	225
IPR011342	Shikimate_DH	NCBIfam	232	501
IPR022893	Shikimate_DH_fam	Hamap	231	507
IPR036291	NAD(P)-bd_dom_sf	SUPERFAMILY	340	504
IPR001381	DHquinase_I	Pfam	5	222
IPR013785	Aldolase_TIM	Gene3D	1	230
IPR001381	DHquinase_I	CDD	3	224
IPR022893	Shikimate_DH_fam	PANTHER	2	503
IPR013708	Shikimate_DH-bd_N	Pfam	236	316
IPR046346	Aminoacid_DH-like_N_sf	SUPERFAMILY	223	329
IPR041121	SDH_C	Pfam	475	504
IPR006151	Shikm_DH/Glu-tRNA_Rdtase	Pfam	354	414
IPR011342	Shikimate_DH	TIGRFAM	232	501
IPR013708	Shikimate_DH-bd_N	Pfam	236	316
IPR036291	NAD(P)-bd_dom_sf	SUPERFAMILY	340	504
IPR013785	Aldolase_TIM	Gene3D	1	230
IPR001381	DHquinase_I	TIGRFAM	4	221
IPR001381	DHquinase_I	Hamap	3	225
IPR041121	SDH_C	Pfam	475	504
IPR001381	DHquinase_I	Pfam	5	222
IPR022893	Shikimate_DH_fam	PANTHER	1	509
IPR001381	DHquinase_I	CDD	3	224
IPR022893	Shikimate_DH_fam	Hamap	231	507

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d040850_T003

Expression Profile

Co-expression Networks

Functional Annotation