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  5. Zm00001d041173_T001

Zm00001d041173_T001


Description : beta glucosidase 13


Gene families : OG_01_0017062 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0017062_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d041173_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d041173_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_209
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_40


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001360 Glyco_hydro_1 PANTHER 61 539
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 63 541
IPR018120 Glyco_hydro_1_AS ProSitePatterns 447 455
IPR001360 Glyco_hydro_1 PRINTS 447 455
IPR001360 Glyco_hydro_1 PRINTS 470 481
IPR001360 Glyco_hydro_1 PRINTS 491 508
IPR001360 Glyco_hydro_1 PRINTS 515 527
IPR001360 Glyco_hydro_1 PRINTS 369 383
IPR033132 Glyco_hydro_1_N_CS ProSitePatterns 75 89
IPR001360 Glyco_hydro_1 Pfam 68 546
IPR001360 Glyco_hydro_1 Pfam 68 546
IPR033132 Glyco_hydro_1_N_CS ProSitePatterns 75 89
IPR018120 Glyco_hydro_1_AS ProSitePatterns 447 455
IPR001360 Glyco_hydro_1 PANTHER 25 547
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 63 541
IPR001360 Glyco_hydro_1 PRINTS 447 455
IPR001360 Glyco_hydro_1 PRINTS 470 481
IPR001360 Glyco_hydro_1 PRINTS 491 508
IPR001360 Glyco_hydro_1 PRINTS 515 527
IPR001360 Glyco_hydro_1 PRINTS 369 383
HMM Family HMM Length Query Length e-Value Query Start Query End
GH1 429 557 8.9e-167 69 545
No external refs found!