Zm00001d041450_T002

Description : SIN3-like 3

Gene families : OG_01_0007153 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007153_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d041450_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d041450_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_307
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_135

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003712	transcription coregulator activity	None	Extended
MF	GO:0003714	transcription corepressor activity	ISM	GOs from InterProScan
BP	GO:0006355	regulation of DNA-templated transcription	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003822	PAH	ProSiteProfiles	106	176
IPR013194	HDAC_interact_dom	SMART	637	697
IPR036600	PAH_sf	SUPERFAMILY	20	92
IPR039774	Sin3-like	PANTHER	21	287
IPR036600	PAH_sf	SUPERFAMILY	105	175
IPR036600	PAH_sf	Gene3D	104	176
IPR013194	HDAC_interact_dom	Pfam	651	689
IPR003822	PAH	ProSiteProfiles	23	93
IPR003822	PAH	Pfam	129	173
IPR003822	PAH	Pfam	48	90
IPR036600	PAH_sf	Gene3D	29	91
IPR003822	PAH	ProSiteProfiles	23	93
IPR003822	PAH	ProSiteProfiles	106	176
IPR039774	Sin3-like	PANTHER	609	653
IPR039774	Sin3-like	PANTHER	6	201
IPR003822	PAH	Pfam	129	173
IPR003822	PAH	Pfam	48	90
IPR013194	HDAC_interact_dom	SMART	637	697
IPR013194	HDAC_interact_dom	Pfam	651	690
IPR039774	Sin3-like	PANTHER	651	785
IPR039774	Sin3-like	PANTHER	258	590
IPR036600	PAH_sf	SUPERFAMILY	105	175
IPR036600	PAH_sf	Gene3D	29	91
IPR036600	PAH_sf	Gene3D	104	176
IPR036600	PAH_sf	SUPERFAMILY	20	92

No CAZYmes available for this sequence

External Links

No external refs found!