Zm00001d041606_T002

Description : Minichromosome maintenance (MCM2/3/5) family protein

Gene families : OG_01_0010435 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010435_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d041606_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d041606_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_94
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_6

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0003678	DNA helicase activity	ISM	GOs from InterProScan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	ISM	GOs from InterProScan
BP	GO:0006270	DNA replication initiation	ISM	GOs from InterProScan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0032392	DNA geometric change	None	Extended
BP	GO:0032508	DNA duplex unwinding	ISM	GOs from InterProScan
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
CC	GO:0042555	MCM complex	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0071103	DNA conformation change	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR027417	P-loop_NTPase	Gene3D	313	648
IPR001208	MCM_dom	ProSiteProfiles	328	534
IPR031327	MCM	PANTHER	10	688
IPR033762	MCM_OB	Pfam	145	276
IPR001208	MCM_dom	Pfam	316	538
IPR041562	MCM_lid	Pfam	567	641
IPR012340	NA-bd_OB-fold	Gene3D	145	274
IPR031327	MCM	SMART	141	643
IPR012340	NA-bd_OB-fold	SUPERFAMILY	13	296
IPR027417	P-loop_NTPase	SUPERFAMILY	338	649
IPR008050	MCM7	PRINTS	122	134
IPR008050	MCM7	PRINTS	287	297
IPR008050	MCM7	PRINTS	178	189
IPR008050	MCM7	PRINTS	195	207
IPR008050	MCM7	PRINTS	160	171
IPR001208	MCM_dom	PRINTS	369	384
IPR001208	MCM_dom	PRINTS	429	443
IPR001208	MCM_dom	PRINTS	481	493
IPR001208	MCM_dom	PRINTS	457	470
IPR001208	MCM_dom	PRINTS	508	516
IPR018525	MCM_CS	ProSitePatterns	437	445
IPR027925	MCM_N	Pfam	13	95
IPR008050	MCM7	CDD	331	641
IPR012340	NA-bd_OB-fold	SUPERFAMILY	13	296
IPR008050	MCM7	CDD	331	641
IPR001208	MCM_dom	ProSiteProfiles	328	534
IPR001208	MCM_dom	Pfam	316	538
IPR033762	MCM_OB	Pfam	145	276
IPR041562	MCM_lid	Pfam	567	641
IPR027417	P-loop_NTPase	Gene3D	313	648
IPR027417	P-loop_NTPase	SUPERFAMILY	338	649
IPR018525	MCM_CS	ProSitePatterns	437	445
IPR008050	MCM7	PRINTS	122	134
IPR008050	MCM7	PRINTS	287	297
IPR008050	MCM7	PRINTS	178	189
IPR008050	MCM7	PRINTS	195	207
IPR008050	MCM7	PRINTS	160	171
IPR031327	MCM	PANTHER	36	701
IPR031327	MCM	SMART	141	643
IPR027925	MCM_N	Pfam	13	103
IPR001208	MCM_dom	PRINTS	369	384
IPR001208	MCM_dom	PRINTS	429	443
IPR001208	MCM_dom	PRINTS	481	493
IPR001208	MCM_dom	PRINTS	457	470
IPR001208	MCM_dom	PRINTS	508	516
IPR008050	MCM7	PANTHER	36	701

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d041606_T002

Expression Profile

Co-expression Networks

Functional Annotation