Zm00001d041715_T003

Description : Fibronectin type III domain-containing protein

Gene families : OG_01_0017125 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0017125_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d041715_T003
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d041715_T003
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_296
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_33

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006338	chromatin remodeling	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009409	response to cold	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010048	vernalization response	ISM	GOs from InterProScan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0040029	epigenetic regulation of gene expression	ISM	GOs from InterProScan
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071824	protein-DNA complex organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003961	FN3_dom	SMART	337	420
IPR003961	FN3_dom	Pfam	341	420
IPR032881	Oberon-like_PHD	Pfam	141	256
IPR003961	FN3_dom	ProSiteProfiles	336	434
IPR013783	Ig-like_fold	Gene3D	337	433
IPR003961	FN3_dom	CDD	337	429
IPR036116	FN3_sf	SUPERFAMILY	328	429
IPR044514	VIN3-like	PANTHER	18	697
IPR044514	VIN3-like	PANTHER	54	697
IPR003961	FN3_dom	SMART	337	420
IPR032881	Oberon-like_PHD	Pfam	141	256
IPR036116	FN3_sf	SUPERFAMILY	328	429
IPR013783	Ig-like_fold	Gene3D	337	433
IPR003961	FN3_dom	CDD	337	429
IPR003961	FN3_dom	ProSiteProfiles	336	434
IPR003961	FN3_dom	Pfam	341	420

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d041715_T003

Expression Profile

Co-expression Networks

Functional Annotation