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  5. Zm00001d041871_T001

Zm00001d041871_T001


Description : calcium-dependent protein kinase 4


Gene families : OG_01_0001270 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001270_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d041871_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d041871_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_252
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_93


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
MF GO:0005524 ATP binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002048 EF_hand_dom ProSiteProfiles 138 173
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 221 233
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 187 199
IPR011992 EF-hand-dom_pair SUPERFAMILY 99 239
IPR002048 EF_hand_dom CDD 107 166
IPR017441 Protein_kinase_ATP_BS ProSitePatterns 55 78
IPR002048 EF_hand_dom CDD 179 238
IPR002048 EF_hand_dom ProSiteProfiles 212 243
IPR002048 EF_hand_dom Pfam 107 167
IPR002048 EF_hand_dom Pfam 177 238
IPR011009 Kinase-like_dom_sf SUPERFAMILY 34 97
IPR002048 EF_hand_dom ProSiteProfiles 102 137
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 151 163
IPR002048 EF_hand_dom ProSiteProfiles 174 209
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 115 127
IPR002048 EF_hand_dom SMART 212 240
IPR002048 EF_hand_dom SMART 106 134
IPR002048 EF_hand_dom SMART 178 206
IPR002048 EF_hand_dom SMART 142 170
IPR017441 Protein_kinase_ATP_BS ProSitePatterns 55 78
IPR011009 Kinase-like_dom_sf SUPERFAMILY 34 97
IPR002048 EF_hand_dom CDD 107 166
IPR002048 EF_hand_dom ProSiteProfiles 212 243
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 221 233
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 187 199
IPR002048 EF_hand_dom Pfam 107 167
IPR002048 EF_hand_dom Pfam 177 238
IPR011992 EF-hand-dom_pair SUPERFAMILY 99 239
IPR002048 EF_hand_dom CDD 179 238
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 151 163
IPR002048 EF_hand_dom ProSiteProfiles 102 137
IPR002048 EF_hand_dom ProSiteProfiles 174 209
IPR002048 EF_hand_dom SMART 212 240
IPR002048 EF_hand_dom SMART 106 134
IPR002048 EF_hand_dom SMART 178 206
IPR002048 EF_hand_dom SMART 142 170
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 115 127
IPR002048 EF_hand_dom ProSiteProfiles 138 173

No CAZYmes available for this sequence

No external refs found!