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  5. Zm00001d041880_T001

Zm00001d041880_T001


Description : beta galactosidase 9


Gene families : OG_01_0001176 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001176_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d041880_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d041880_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_18
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_101


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
MF GO:0030246 carbohydrate binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR043159 Lectin_gal-bd_sf Gene3D 820 913
IPR048913 BetaGal_gal-bd Pfam 684 770
IPR000922 Lectin_gal-bd_dom ProSiteProfiles 821 906
IPR001944 Glycoside_Hdrlase_35 PRINTS 681 695
IPR001944 Glycoside_Hdrlase_35 PRINTS 322 337
IPR001944 Glycoside_Hdrlase_35 PRINTS 73 90
IPR001944 Glycoside_Hdrlase_35 PRINTS 285 300
IPR001944 Glycoside_Hdrlase_35 PRINTS 149 168
IPR001944 Glycoside_Hdrlase_35 PRINTS 342 358
IPR001944 Glycoside_Hdrlase_35 PRINTS 94 112
IPR001944 Glycoside_Hdrlase_35 PRINTS 206 221
IPR001944 Glycoside_Hdrlase_35 PRINTS 708 724
IPR008979 Galactose-bd-like_sf SUPERFAMILY 450 634
IPR000922 Lectin_gal-bd_dom Pfam 829 905
IPR008979 Galactose-bd-like_sf SUPERFAMILY 646 812
IPR019801 Glyco_hydro_35_CS ProSitePatterns 208 220
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 60 379
IPR041392 GHD Pfam 415 466
IPR001944 Glycoside_Hdrlase_35 PANTHER 31 818
IPR031330 Gly_Hdrlase_35_cat Pfam 70 374
IPR001944 Glycoside_Hdrlase_35 PANTHER 61 898
IPR008979 Galactose-bd-like_sf SUPERFAMILY 450 634
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 60 379
IPR043159 Lectin_gal-bd_sf Gene3D 820 913
IPR001944 Glycoside_Hdrlase_35 PRINTS 681 695
IPR001944 Glycoside_Hdrlase_35 PRINTS 322 337
IPR001944 Glycoside_Hdrlase_35 PRINTS 73 90
IPR001944 Glycoside_Hdrlase_35 PRINTS 285 300
IPR001944 Glycoside_Hdrlase_35 PRINTS 149 168
IPR001944 Glycoside_Hdrlase_35 PRINTS 342 358
IPR001944 Glycoside_Hdrlase_35 PRINTS 94 112
IPR001944 Glycoside_Hdrlase_35 PRINTS 206 221
IPR001944 Glycoside_Hdrlase_35 PRINTS 708 724
IPR031330 Gly_Hdrlase_35_cat Pfam 70 374
IPR000922 Lectin_gal-bd_dom ProSiteProfiles 821 906
IPR041392 GHD Pfam 387 466
IPR008979 Galactose-bd-like_sf SUPERFAMILY 646 812
IPR000922 Lectin_gal-bd_dom Pfam 829 905
IPR019801 Glyco_hydro_35_CS ProSitePatterns 208 220
HMM Family HMM Length Query Length e-Value Query Start Query End
GH35 307 919 1.6e-109 70 373
No external refs found!