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  5. Zm00001d041945_T003

Zm00001d041945_T003


Description : transducin family protein / WD-40 repeat family protein


Gene families : OG_01_0005066 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005066_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d041945_T003
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d041945_T003
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_218
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_202


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt ProSiteProfiles 218 259
IPR001680 WD40_rpt ProSiteProfiles 388 425
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 87 423
IPR001680 WD40_rpt ProSiteProfiles 263 304
IPR001680 WD40_rpt ProSiteProfiles 176 217
IPR001680 WD40_rpt ProSiteProfiles 346 387
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 96 420
IPR019775 WD40_repeat_CS ProSitePatterns 324 338
IPR001680 WD40_rpt ProSiteProfiles 305 338
IPR001680 WD40_rpt SMART 127 166
IPR001680 WD40_rpt SMART 298 337
IPR001680 WD40_rpt SMART 83 124
IPR001680 WD40_rpt SMART 253 295
IPR001680 WD40_rpt SMART 339 378
IPR001680 WD40_rpt SMART 169 208
IPR001680 WD40_rpt SMART 381 420
IPR001680 WD40_rpt SMART 211 250
IPR001680 WD40_rpt Pfam 172 208
IPR001680 WD40_rpt Pfam 383 420
IPR001680 WD40_rpt Pfam 345 378
IPR001680 WD40_rpt Pfam 133 166
IPR001680 WD40_rpt Pfam 215 250
IPR001680 WD40_rpt Pfam 299 337
IPR001680 WD40_rpt Pfam 257 293
IPR020472 G-protein_beta_WD-40_rep PRINTS 365 379
IPR020472 G-protein_beta_WD-40_rep PRINTS 237 251
IPR020472 G-protein_beta_WD-40_rep PRINTS 324 338
IPR001680 WD40_rpt ProSiteProfiles 134 175
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 87 423
IPR001680 WD40_rpt ProSiteProfiles 305 338
IPR020472 G-protein_beta_WD-40_rep PRINTS 365 379
IPR020472 G-protein_beta_WD-40_rep PRINTS 237 251
IPR020472 G-protein_beta_WD-40_rep PRINTS 324 338
IPR001680 WD40_rpt ProSiteProfiles 346 387
IPR001680 WD40_rpt SMART 127 166
IPR001680 WD40_rpt SMART 298 337
IPR001680 WD40_rpt SMART 83 124
IPR001680 WD40_rpt SMART 253 295
IPR001680 WD40_rpt SMART 381 420
IPR001680 WD40_rpt SMART 169 208
IPR001680 WD40_rpt SMART 339 378
IPR001680 WD40_rpt SMART 211 250
IPR001680 WD40_rpt ProSiteProfiles 134 175
IPR001680 WD40_rpt ProSiteProfiles 388 425
IPR001680 WD40_rpt ProSiteProfiles 263 304
IPR019775 WD40_repeat_CS ProSitePatterns 324 338
IPR001680 WD40_rpt ProSiteProfiles 218 259
IPR001680 WD40_rpt Pfam 257 293
IPR001680 WD40_rpt Pfam 215 250
IPR001680 WD40_rpt Pfam 299 337
IPR001680 WD40_rpt Pfam 175 208
IPR001680 WD40_rpt Pfam 348 378
IPR001680 WD40_rpt Pfam 383 420
IPR001680 WD40_rpt Pfam 133 166
IPR001680 WD40_rpt ProSiteProfiles 176 217
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 96 420

No CAZYmes available for this sequence

No external refs found!